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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "BiocIO" in publications use:'
type: software
license: Artistic-2.0
title: 'BiocIO: Standard Input and Output for Bioconductor Packages'
version: 1.15.2
doi: 10.32614/CRAN.package.BiocIO
abstract: The `BiocIO` package contains high-level abstract classes and generics used
  by developers to build IO funcionality within the Bioconductor suite of packages.
  Implements `import()` and `export()` standard generics for importing and exporting
  biological data formats. `import()` supports whole-file as well as chunk-wise iterative
  import. The `import()` interface optionally provides a standard mechanism for 'lazy'
  access via `filter()` (on row or element-like components of the file resource),
  `select()` (on column-like components of the file resource) and `collect()`. The
  `import()` interface optionally provides transparent access to remote (e.g. via
  https) as well as local access. Developers can register a file extension, e.g.,
  `.loom` for dispatch from character-based URIs to specific `import()` / `export()`
  methods based on classes representing file types, e.g., `LoomFile()`.
authors:
- family-names: Morgan
  given-names: Martin
- family-names: Lawrence
  given-names: Michael
- family-names: Van Twisk
  given-names: Daniel
- family-names: Ramos
  given-names: Marcel
  email: marcel.ramos@sph.cuny.edu
  orcid: https://orcid.org/0000-0002-3242-0582
repository: https://link-ny.r-universe.dev
repository-code: https://github.com/Bioconductor/BiocIO
commit: b8e38e8408c14a4d390e71ac5b65c9b579faef18
url: https://github.com/Bioconductor/BiocIO
date-released: '2024-08-22'
contact:
- family-names: Ramos
  given-names: Marcel
  email: marcel.ramos@sph.cuny.edu
  orcid: https://orcid.org/0000-0002-3242-0582