{
  "_id": "6a1ef98eb401979e7341801d",
  "Package": "BiocArchive",
  "Title": "Access the Bioconductor archives and install packages from\nprevious releases",
  "Version": "1.0.5",
  "Authors@R": "person(\n\"Marcel\", \"Ramos\", , \"marcel.ramos@sph.cuny.edu\",\nc(\"aut\", \"cre\"), c(ORCID = \"0000-0002-3242-0582\")\n)",
  "Description": "Install older versions of Bioconductor based on the R\nversion currently installed in the system. The package relies\non BiocManager to install packages but makes sure that CRAN\npackage versions are downloaded from P3M snapshots. These\nsnapshots will conincide with the last published built date of\nthe requested Bioconductor version.",
  "VignetteBuilder": "knitr",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "Date": "2026-05-18",
  "Config/roxygen2/version": "8.0.0",
  "Config/pak/sysreqs": "libicu-dev libxml2-dev libssl-dev",
  "Repository": "https://link-ny.r-universe.dev",
  "Date/Publication": "2026-05-18 21:40:35 UTC",
  "RemoteUrl": "https://github.com/Bioconductor/BiocArchive",
  "RemoteRef": "HEAD",
  "RemoteSha": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-18 22:58:36 UTC",
    "User": "root"
  },
  "Author": "Marcel Ramos [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-3242-0582>)",
  "Maintainer": "Marcel Ramos <marcel.ramos@sph.cuny.edu>",
  "MD5sum": "5b942894168dcade61ba839395ac9718",
  "_user": "link-ny",
  "_type": "src",
  "_file": "BiocArchive_1.0.5.tar.gz",
  "_fileid": "6b3f1d905bc3fad883083edb8ce4eb640dac75397edef2c7f6c40ac50ab4d4fd",
  "_filesize": 375317,
  "_sha256": "6b3f1d905bc3fad883083edb8ce4eb640dac75397edef2c7f6c40ac50ab4d4fd",
  "_created": "2026-05-18T22:58:36.000Z",
  "_published": "2026-06-02T15:41:02.600Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79110828884,
      "time": 136,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7071026166"
    },
    {
      "job": 79110829749,
      "time": 139,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7071026999"
    },
    {
      "job": 79110830241,
      "time": 103,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7071018310"
    },
    {
      "job": 79110828676,
      "time": 102,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7071018330"
    },
    {
      "job": 79110828458,
      "time": 161,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7070993555"
    },
    {
      "job": 79110828364,
      "time": 106,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7362584087"
    },
    {
      "job": 79110829144,
      "time": 75,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "ERROR",
      "artifact": "7071012076"
    },
    {
      "job": 79110829863,
      "time": 85,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7071014314"
    },
    {
      "job": 79110830208,
      "time": 107,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7071019239"
    }
  ],
  "_buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/Bioconductor/BiocArchive",
  "_commit": {
    "id": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
    "author": "LiNk-NY <marcel.ramos@sph.cuny.edu>",
    "committer": "LiNk-NY <marcel.ramos@sph.cuny.edu>",
    "message": "version bump 1.0.5\n",
    "time": 1779140435
  },
  "_maintainer": {
    "name": "Marcel Ramos",
    "email": "marcel.ramos@sph.cuny.edu",
    "login": "link-ny",
    "bluesky": "@mramos148.bsky.social",
    "linkedin": "in/mramos148",
    "orcid": "0000-0002-3242-0582",
    "twitter": "@M2RuseR",
    "description": "Sr. Data Scientist @ CUNY School of Public Health: Waldron Lab & Bioconductor Core Team Member /  \nR 📦 dev ",
    "uuid": 4392950
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "BiocManager",
      "role": "Imports"
    },
    {
      "package": "httr",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "memoise",
      "role": "Imports"
    },
    {
      "package": "rvest",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "xml2",
      "role": "Imports"
    },
    {
      "package": "yaml",
      "role": "Imports"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "lubridate",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "tinytest",
      "role": "Suggests"
    }
  ],
  "_owner": "bioconductor",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-30",
      "n": 4
    },
    {
      "week": "2026-18",
      "n": 4
    },
    {
      "week": "2026-21",
      "n": 9
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "link-ny",
      "count": 23,
      "uuid": 4392950
    }
  ],
  "_userbio": {
    "uuid": 4392950,
    "type": "user",
    "name": "Marcel Ramos Pérez",
    "description": "Sr. Data Scientist @ CUNY School of Public Health: Waldron Lab & Bioconductor Core Team Member /  \r\nR :package: dev "
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BiocArchive"
  },
  "_devurl": "https://github.com/bioconductor/biocarchive",
  "_searchresults": 3,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/BiocArchive.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "checkBioCmirror",
    "CRANinstall",
    "install",
    "lastBuilt",
    "repositories",
    "valid"
  ],
  "_help": [
    {
      "page": "checkBioCmirror",
      "title": "Check whether a Bioconductor mirror is configured",
      "topics": [
        "checkBioCmirror"
      ]
    },
    {
      "page": "CRANinstall",
      "title": "Install packages from the CRAN archive",
      "topics": [
        "CRANinstall"
      ]
    },
    {
      "page": "install",
      "title": "Install packages from a previous release of Bioconductor for reproducibility",
      "topics": [
        "BiocArchive.snapshot",
        "BiocManager.snapshot",
        "install"
      ]
    },
    {
      "page": "lastBuilt",
      "title": "Obtain the last build date for a particular Bioconductor version",
      "topics": [
        "lastBuilt"
      ]
    },
    {
      "page": "repositories",
      "title": "Display Bioconductor and CRAN snapshot repositories",
      "topics": [
        "repositories"
      ]
    },
    {
      "page": "valid",
      "title": "Validate installed packages versions against archive constraints",
      "topics": [
        "valid"
      ]
    }
  ],
  "_readme": "https://github.com/Bioconductor/BiocArchive/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "BiocManager",
    "cachem",
    "cli",
    "curl",
    "fastmap",
    "glue",
    "httr",
    "jsonlite",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "openssl",
    "pillar",
    "pkgconfig",
    "R6",
    "rlang",
    "rvest",
    "selectr",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "utf8",
    "vctrs",
    "xml2",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "BiocArchive.Rmd",
      "filename": "BiocArchive.html",
      "title": "BiocArchive: Installation of Legacy Bioconductor Releases",
      "author": "Marcel Ramos",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Installation",
        "Load the package",
        "Last release version",
        "Archived installations",
        "Docker installation",
        "Bioconductor installations",
        "P3M installations",
        "CRAN installations from the source archive",
        "Repository URLs",
        "Package validity",
        "Session Information"
      ],
      "created": "2023-02-02 23:20:59",
      "modified": "2025-07-23 20:00:00",
      "commits": 10
    }
  ],
  "_score": 3.1760912590556813,
  "_indexed": false,
  "_nocasepkg": "biocarchive",
  "_universes": [
    "link-ny"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-05-18T23:00:44.000Z",
      "distro": "noble",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "abc79fe847781fe128de46e309cd3543eba742514ef84d8af5661b6ff87eff70",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-05-18T23:00:46.000Z",
      "distro": "noble",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "c40bf91ad46ea9fbf26ce4a6d14bedd1fd39a14562c8996a9587bdc9af8b041b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-05-18T23:00:12.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "90c1035fc9779d33337bf3125d741016b758f5ca94cf08c42ca60856b6d83cc7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-05-18T23:00:16.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "9636838075e6197f10f843063b1d68c423b96841c071fc02042b0f95f587c1d5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-05-18T22:59:43.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "3c4c853ad0e254ec338d3663a894ca57529c7ebd209fda14f030d37c02446311",
      "status": "failure",
      "check": "ERROR",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-05-18T22:59:51.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "3ee8d1a03d3ff4d61840b9501e670affb700a8515561ea0483ee6511e35d1add",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-05-18T23:00:12.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "6613b3c157c2ba316ff2b329502e7ae3b808435885679060fee7228a7835782e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.5",
      "date": "2026-06-02T15:40:38.000Z",
      "commit": "7896c2a14e6c0ee550948140872cf1ce69af0bfb",
      "fileid": "5d998770ce0cdad9764f0e4e83a9a327655347d154b13439aafce9f3ed79fba0",
      "status": "success",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26065220263"
    }
  ]
}