{
  "_id": "6a1fcd62b401979e7343324f",
  "Package": "OncoTree",
  "Title": "Expose the OncoTree API for R",
  "Version": "0.0.0.9000",
  "Authors@R": "person(\"Marcel\", \"Ramos\", , \"marcel.ramos@sph.cuny.edu\", c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-3242-0582\"))",
  "Description": "Expose the OncoTree API for R. OncoTree is a standardized\nontology of cancer terms that is used to annotate cancer data.\nThis package provides a set of functions to query the OncoTree\nAPI and retrieve information about cancer types, subtypes, and\ntheir relationships.",
  "License": "Artistic-2.0",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.1",
  "Config/pak/sysreqs": "cmake make libicu-dev libsecret-1-dev libuv1-dev\nlibssl-dev zlib1g-dev",
  "Repository": "https://link-ny.r-universe.dev",
  "Date/Publication": "2024-04-23 14:37:21 UTC",
  "RemoteUrl": "https://github.com/LiNk-NY/OncoTree",
  "RemoteRef": "HEAD",
  "RemoteSha": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-03 06:42:04 UTC",
    "User": "root"
  },
  "Author": "Marcel Ramos [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-3242-0582>)",
  "Maintainer": "Marcel Ramos <marcel.ramos@sph.cuny.edu>",
  "MD5sum": "909854e16dd82a9831311284d62eddec",
  "_user": "link-ny",
  "_type": "src",
  "_file": "OncoTree_0.0.0.9000.tar.gz",
  "_fileid": "740b6a9d76775a0dac343be3611de60c3e02855bc8dc6b841caf4b7c49be7d35",
  "_filesize": 38569,
  "_sha256": "740b6a9d76775a0dac343be3611de60c3e02855bc8dc6b841caf4b7c49be7d35",
  "_created": "2026-06-03T06:42:04.000Z",
  "_published": "2026-06-03T06:44:50.279Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79236888909,
      "time": 138,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7377525205"
    },
    {
      "job": 79236888937,
      "time": 132,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7377523778"
    },
    {
      "job": 79236888898,
      "time": 82,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7377511541"
    },
    {
      "job": 79236888932,
      "time": 78,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7377511301"
    },
    {
      "job": 79236490739,
      "time": 176,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377484832"
    },
    {
      "job": 79236888923,
      "time": 118,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7377519192"
    },
    {
      "job": 79236888914,
      "time": 85,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7377509779"
    },
    {
      "job": 79236888903,
      "time": 78,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7377508102"
    },
    {
      "job": 79236888902,
      "time": 83,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7377509729"
    }
  ],
  "_buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/LiNk-NY/OncoTree",
  "_commit": {
    "id": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
    "author": "LiNk-NY <marcel.ramos@roswellpark.org>",
    "committer": "LiNk-NY <marcel.ramos@roswellpark.org>",
    "message": "initial commit\n",
    "time": 1713883041
  },
  "_maintainer": {
    "name": "Marcel Ramos",
    "email": "marcel.ramos@sph.cuny.edu",
    "login": "link-ny",
    "bluesky": "@mramos148.bsky.social",
    "linkedin": "in/mramos148",
    "orcid": "0000-0002-3242-0582",
    "twitter": "@M2RuseR",
    "description": "Sr. Data Scientist @ CUNY School of Public Health: Waldron Lab & Bioconductor Core Team Member /  \nR 📦 dev ",
    "uuid": 4392950
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "AnVIL",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    }
  ],
  "_owner": "link-ny",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 4392950,
    "type": "user",
    "name": "Marcel Ramos Pérez",
    "description": "Sr. Data Scientist @ CUNY School of Public Health: Waldron Lab & Bioconductor Core Team Member /  \r\nR :package: dev "
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/OncoTree"
  },
  "_devurl": "https://github.com/link-ny/oncotree",
  "_searchresults": 20,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/OncoTree.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "nameLookup",
    "OncoTree",
    "operations",
    "searchTypeQuery",
    "tumorTypes"
  ],
  "_help": [],
  "_rundeps": [
    "AnVIL",
    "AnVILBase",
    "askpass",
    "base64enc",
    "BiocBaseUtils",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "cpp11",
    "crosstalk",
    "curl",
    "digest",
    "dplyr",
    "DT",
    "evaluate",
    "fastmap",
    "filelock",
    "fontawesome",
    "formatR",
    "fs",
    "futile.logger",
    "futile.options",
    "GCPtools",
    "generics",
    "glue",
    "highr",
    "htmltools",
    "htmlwidgets",
    "httpuv",
    "httr",
    "httr2",
    "jquerylib",
    "jsonlite",
    "keyring",
    "knitr",
    "lambda.r",
    "later",
    "lazyeval",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "miniUI",
    "openssl",
    "otel",
    "pillar",
    "pkgconfig",
    "promises",
    "purrr",
    "R6",
    "rapiclient",
    "rappdirs",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "sass",
    "shiny",
    "sourcetools",
    "stringi",
    "stringr",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "tinytex",
    "utf8",
    "vctrs",
    "withr",
    "xfun",
    "xtable",
    "yaml"
  ],
  "_score": 1.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "oncotree",
  "_universes": [
    "link-ny"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:44:20.000Z",
      "distro": "noble",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "6a291bca0af574ad11bd124e64c9759fc1bc0acf179d8491608e4bfff8c2a30d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:44:14.000Z",
      "distro": "noble",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "39389217212b5e688deb75470d1c196740d792ef2587630eb3c313846b0ddfaf",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:43:39.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "8041ad7dd276390e087c4dab8df2e273fd1f9448563938ccdd1e1ce7de419562",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:43:37.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "f94d361dbcfdce96b975bd1db98f3a9b39e7c02c88a3a1a6366e91936c143c58",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:44:15.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "6c95e48279383b446a3dfc874e0493b0b1f8288a2cc4c31d847ccea14c0f49c6",
      "status": "success",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:43:23.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "4be364b1c78c60e6ab49d84acdf13ac175df4a184b35c18c5648b9deb2ca29f7",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:43:16.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "c6ef7091e768cf59fd09acbae15975729704b6b6181b7b6ceaa43d37fb05e712",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-06-03T06:43:21.000Z",
      "commit": "c4f6fcc2eebcc5ad6a4715e98bb7f8c2f7f31d31",
      "fileid": "bc2f0d7f3bd424bad688bd75481a230acfa315fd76d8b72dfdec88f4092c4fab",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/link-ny/actions/runs/26868138868"
    }
  ]
}