This package is considered a duplicate. The official version of this package is found at:https://bioc.r-universe.dev/AnVILPublish

Package: AnVILPublish 1.23.5

AnVILPublish: Publish Packages and Other Resources to AnVIL Workspaces

Use this package to create or update AnVIL workspaces from resources such as R / Bioconductor packages. The metadata about the package (e.g., select information from the package DESCRIPTION file and from vignette YAML headings) are used to populate the 'DASHBOARD'. Vignettes are translated to python notebooks ready for evaluation in AnVIL.

Authors:Marcel Ramos [aut, cre], Martin Morgan [aut], Kayla Interdonato [aut], Vincent Carey [ctb], NHGRI [fnd]

AnVILPublish_1.23.5.tar.gz
AnVILPublish_1.23.5.zip(r-4.7)AnVILPublish_1.23.5.zip(r-4.6)AnVILPublish_1.23.5.zip(r-4.5)
AnVILPublish_1.23.5.tgz(r-4.6-any)AnVILPublish_1.23.5.tgz(r-4.5-any)
AnVILPublish_1.23.5.tar.gz(r-4.7-any)AnVILPublish_1.23.5.tar.gz(r-4.6-any)
AnVILPublish_1.23.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
AnVILPublish/json (API)
NEWS

# Install 'AnVILPublish' in R:

install.packages('AnVILPublish', repos = c('https://link-ny.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/anvilpublish/issues

On BioConductor:AnVILPublish-1.23.0(bioc 3.24)AnVILPublish-1.22.0(bioc 3.23)

infrastructure software u24hg010263

5.65 score 1 packages 3 scripts 4 exports 85 dependencies

Last updated from:06e578a38e. Checks:7 NOTE, 2 OK. Indexed: no.

Target	Result	Time
linux-devel-x86_64	NOTE	157
source / vignettes	OK	206
linux-release-x86_64	NOTE	184
macos-release-arm64	NOTE	92
macos-oldrel-arm64	NOTE	96
windows-devel	NOTE	110
windows-release	NOTE	100
windows-oldrel	NOTE	92
wasm-release	OK	123

Exports:add_access as_notebook as_workspace create_workspace

Dependencies:AnVIL AnVILBase AnVILGCP askpass base64enc BiocBaseUtils BiocManager bit bit64 bslib cachem cli clipr commonmark cpp11 crayon crosstalk curl digest dplyr DT evaluate fastmap filelock fontawesome formatR fs futile.logger futile.options GCPtools generics glue highr hms htmltools htmlwidgets httpuv httr httr2 jquerylib jsonlite keyring knitr lambda.r later lazyeval lifecycle magrittr memoise mime miniUI openssl otel pillar pkgconfig prettyunits progress promises purrr R6 rapiclient rappdirs Rcpp readr rlang rmarkdown sass shiny sourcetools stringi stringr sys tibble tidyr tidyselect tinytex tzdb utf8 vctrs vroom whisker withr xfun xtable yaml

Publishing R / Bioconductor Packages To AnVIL Workspaces

Martin Morgan

Rendered fromAnVILPublishIntro.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2026-05-27
Started: 2020-08-17

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Add Bioconductor_User group to workspace access	add_access
Render vignettes as .ipynb notebooks	as_notebook
Render R packages as AnVIL workspaces	as_workspace
Create an AnVIL Workspace	create_workspace