Installing and Managing Bioconductor PackagesUpdated 7 days ago

Marcel Ramos, Martin Morgan

Rendered from BiocManager.Rmd in BiocManager 1.30.25.1.
Installing and Managing Bioconductor PackagesUpdated 7 days ago

Marcel Ramos, Martin Morgan

Rendered from BiocManager.Rmd in BiocManager 1.30.25.1.
MultiAssayExperiment: Quick Start GuideUpdated 29 days ago

Marcel Ramos & Levi Waldron

Rendered from QuickStartMultiAssay.Rmd in MultiAssayExperiment 1.33.9.
MultiAssayExperiment: Quick Start GuideUpdated 29 days ago

Marcel Ramos & Levi Waldron

Rendered from QuickStartMultiAssay.Rmd in MultiAssayExperiment 1.33.9.
MultiAssayExperiment: The Integrative Bioconductor ContainerUpdated 29 days ago

MultiAssay Special Interest Group

Rendered from MultiAssayExperiment.Rmd in MultiAssayExperiment 1.33.9.
MultiAssayExperiment: The Integrative Bioconductor ContainerUpdated 29 days ago

MultiAssay Special Interest Group

Rendered from MultiAssayExperiment.Rmd in MultiAssayExperiment 1.33.9.
UniProt.ws: A package for retrieving data from the UniProt web serviceUpdated 2 months ago

Marc Carlson

Rendered from UniProt.ws.Rmd in UniProt.ws 2.47.6.
UniProt.ws: A package for retrieving data from the UniProt web serviceUpdated 2 months ago

Marc Carlson

Rendered from UniProt.ws.Rmd in UniProt.ws 2.47.6.
cBioPortalData: Data Build ErrorsUpdated 2 months ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalDataErrors.Rmd in cBioPortalData 2.19.13.
cBioPortalData: Data Build ErrorsUpdated 2 months ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalDataErrors.Rmd in cBioPortalData 2.19.8.
cBioPortalData: User GuideUpdated 2 months ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalData.Rmd in cBioPortalData 2.19.13.
cBioPortalData: User GuideUpdated 2 months ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalData.Rmd in cBioPortalData 2.19.8.
Introduction to the AnVIL packageUpdated 3 months ago

Nitesh Turaga, Vincent Carey, BJ Stubbs, Marcel Ramos, Martin Morgan

Rendered from Introduction.Rmd in AnVIL 1.19.8.
Introduction to the AnVIL packageUpdated 3 months ago

Nitesh Turaga, Vincent Carey, BJ Stubbs, Marcel Ramos, Martin Morgan

Rendered from Introduction.Rmd in AnVIL 1.19.8.
BiocCheck: Ensuring Bioconductor package guidelinesUpdated 4 months ago

Marcel Ramos

Rendered from BiocCheck.Rmd in BiocCheck 1.43.11.
BiocCheck: Ensuring Bioconductor package guidelinesUpdated 4 months ago

Marcel Ramos

Rendered from BiocCheck.Rmd in BiocCheck 1.43.11.
How to version bump and branchUpdated 4 months ago

Bioconductor Maintainer

Rendered from Version-bump-and-branch-creation-HOWTO.Rmd in ReleaseLaunch 0.99.28.
Running an AnVIL workflow within RUpdated 4 months ago

Kayla Interdonato, Yubo Cheng, Martin Morgan

Rendered from RunningWorkflow.Rmd in AnVIL 1.19.8.
Running an AnVIL workflow within RUpdated 4 months ago

Kayla Interdonato, Yubo Cheng, Martin Morgan

Rendered from RunningWorkflow.Rmd in AnVIL 1.19.8.
Introduction to the AnVILAz packageUpdated 4 months ago

Marcel Ramos, Martin Morgan

Rendered from IntroductionToAnVILAz.Rmd in AnVILAz 1.1.0.
Working with workspaces on AnVIL AzureUpdated 4 months ago

Marcel Ramos, Martin Morgan

Rendered from AnVILAzWorkspaces.Rmd in AnVILAz 1.1.0.
Introduction to the AnVILAz packageUpdated 4 months ago

Marcel Ramos, Martin Morgan

Rendered from IntroductionToAnVILAz.Rmd in AnVILAz 1.1.0.
Working with workspaces on AnVIL AzureUpdated 4 months ago

Marcel Ramos, Martin Morgan

Rendered from AnVILAzWorkspaces.Rmd in AnVILAz 1.1.0.
Working with AnVIL on GCPUpdated 4 months ago

Nitesh Turaga, Vincent Carey, BJ Stubbs, Marcel Ramos, Martin Morgan

Rendered from AnVILGCPIntroduction.Rmd in AnVILGCP 1.1.3.
Working with AnVIL on GCPUpdated 4 months ago

Nitesh Turaga, Vincent Carey, BJ Stubbs, Marcel Ramos, Martin Morgan

Rendered from AnVILGCPIntroduction.Rmd in AnVILGCP 1.1.3.
ASCAT to RaggedExperimentUpdated 4 months ago

Lydia King, Marcel Ramos

Rendered from ASCAT_to_RaggedExperiment.Rmd in RaggedExperiment 1.31.1.
ASCAT to RaggedExperimentUpdated 4 months ago

Lydia King, Marcel Ramos

Rendered from ASCAT_to_RaggedExperiment.Rmd in RaggedExperiment 1.31.1.
curatedTCGADataUpdated 4 months ago

Marcel Ramos

Rendered from curatedTCGAData.Rmd in curatedTCGAData 1.29.1.
curatedTCGADataUpdated 4 months ago

Marcel Ramos

Rendered from curatedTCGAData.Rmd in curatedTCGAData 1.29.1.
ECCITEseq Peripheral BloodUpdated 4 months ago

Dario Righelli

Rendered from ECCITEseq.Rmd in SingleCellMultiModal 1.19.1.
PBMCs profiled with the Chromium Single Cell Multiome ATAC + Gene Expression from 10xUpdated 4 months ago

Marcel Ramos

Rendered from scMultiome.Rmd in SingleCellMultiModal 1.19.1.
ECCITEseq Peripheral BloodUpdated 4 months ago

Dario Righelli

Rendered from ECCITEseq.Rmd in SingleCellMultiModal 1.19.1.
PBMCs profiled with the Chromium Single Cell Multiome ATAC + Gene Expression from 10xUpdated 4 months ago

Marcel Ramos

Rendered from scMultiome.Rmd in SingleCellMultiModal 1.19.1.
CITEseq Cord BloodUpdated 4 months ago

Dario Righelli

Rendered from CITEseq.Rmd in SingleCellMultiModal 1.19.1.
G&T-seq Mouse Embryo (8-cell stage)Updated 4 months ago

Marcel Ramos

Rendered from GTseq.Rmd in SingleCellMultiModal 1.19.1.
scNMT Mouse GastrulationUpdated 4 months ago

Marcel Ramos

Rendered from scNMT.Rmd in SingleCellMultiModal 1.19.1.
SCoPE2: macrophage vs monocytesUpdated 4 months ago

Marcel Ramos

Rendered from SCoPE2.Rmd in SingleCellMultiModal 1.19.1.
seqFISH Mouse Visual CortexUpdated 4 months ago

Dario Righelli

Rendered from seqFISH.Rmd in SingleCellMultiModal 1.19.1.
SingleCellMultiModal IntroductionUpdated 4 months ago

Marcel Ramos

Rendered from SingleCellMultiModal.Rmd in SingleCellMultiModal 1.19.1.
CITEseq Cord BloodUpdated 4 months ago

Dario Righelli

Rendered from CITEseq.Rmd in SingleCellMultiModal 1.19.1.
G&T-seq Mouse Embryo (8-cell stage)Updated 4 months ago

Marcel Ramos

Rendered from GTseq.Rmd in SingleCellMultiModal 1.19.1.
scNMT Mouse GastrulationUpdated 4 months ago

Marcel Ramos

Rendered from scNMT.Rmd in SingleCellMultiModal 1.19.1.
SCoPE2: macrophage vs monocytesUpdated 4 months ago

Marcel Ramos

Rendered from SCoPE2.Rmd in SingleCellMultiModal 1.19.1.
seqFISH Mouse Visual CortexUpdated 4 months ago

Dario Righelli

Rendered from seqFISH.Rmd in SingleCellMultiModal 1.19.1.
SingleCellMultiModal IntroductionUpdated 4 months ago

Marcel Ramos

Rendered from SingleCellMultiModal.Rmd in SingleCellMultiModal 1.19.1.
VisiumIO: Import 10X Genomics Visium Experiment DataUpdated 4 months ago

Marcel Ramos

Rendered from VisiumIO.Rmd in VisiumIO 1.3.5.
VisiumIO: Import 10X Genomics Visium Experiment DataUpdated 4 months ago

Marcel Ramos

Rendered from VisiumIO.Rmd in VisiumIO 1.3.5.
TENxIO: Import Single Cell Data FilesUpdated 4 months ago

Marcel Ramos

Rendered from TENxIO.Rmd in TENxIO 1.9.4.
TENxIO: Import Single Cell Data FilesUpdated 4 months ago

Marcel Ramos

Rendered from TENxIO.Rmd in TENxIO 1.9.3.
RaggedExperimentUpdated 4 months ago

Martin Morgan, Marcel Ramos

Rendered from RaggedExperiment.Rmd in RaggedExperiment 1.31.1.
RaggedExperimentUpdated 4 months ago

Martin Morgan, Marcel Ramos

Rendered from RaggedExperiment.Rmd in RaggedExperiment 1.31.1.
Dockstore and Bioconductor for AnVILUpdated 4 months ago

BJ Stubbs, S Gopaulakrishnan, Nitesh Truaga, Martin Morgan, Vincent Carey

Rendered from BiocDockstore.Rmd in AnVIL 1.19.8.
Dockstore and Bioconductor for AnVILUpdated 4 months ago

BJ Stubbs, S Gopaulakrishnan, Nitesh Truaga, Martin Morgan, Vincent Carey

Rendered from BiocDockstore.Rmd in AnVIL 1.19.8.
terraTCGAdata IntroductionUpdated 5 months ago

Marcel Ramos

Rendered from terraTCGAdata.Rmd in terraTCGAdata 1.11.0.
terraTCGAdata IntroductionUpdated 5 months ago

Marcel Ramos

Rendered from terraTCGAdata.Rmd in terraTCGAdata 1.11.0.
Publishing R / Bioconductor Packages To AnVIL WorkspacesUpdated 5 months ago

Martin Morgan

Rendered from AnVILPublishIntro.Rmd in AnVILPublish 1.17.0.
Publishing R / Bioconductor Packages To AnVIL WorkspacesUpdated 5 months ago

Martin Morgan

Rendered from AnVILPublishIntro.Rmd in AnVILPublish 1.17.0.
Introduction to AnVILBaseUpdated 8 months ago

Bioconductor AnVIL SIG

Rendered from AnVILBaseIntroduction.Rmd in AnVILBase 1.1.0.
Introduction to AnVILBaseUpdated 8 months ago

Bioconductor AnVIL SIG

Rendered from AnVILBaseIntroduction.Rmd in AnVILBase 1.1.0.
Transform and Validate JSON and NDJSONUpdated 8 months ago

Martin Morgan, Marcel Ramos

Rendered from a_rjsoncons.Rmd in rjsoncons 1.3.1.9100.
Install archived Bioconductor packages from previous releasesUpdated 9 months ago

Marcel Ramos

Rendered from BiocArchive.Rmd in BiocArchive 1.0.1.
Questions and answers from over the yearsUpdated 9 months ago

Sean Davis

Rendered from questions-and-answers.Rmd in GenomicDataCommons 1.31.1.
The Release ChecklistUpdated 10 months ago

Bioconductor Maintainer

Rendered from ReleaseChecklist.Rmd in ReleaseLaunch 0.99.28.
The GenomicDataCommons PackageUpdated 10 months ago

Sean Davis & Martin Morgan

Rendered from overview.Rmd in GenomicDataCommons 1.31.1.
Working with simple somatic mutationsUpdated 10 months ago

Sean Davis

Rendered from somatic_mutations.Rmd in GenomicDataCommons 1.31.1.
cgdsr to cBioPortalData: Migration TutorialUpdated 1 years ago

Karim Mezhoud & Marcel Ramos

Rendered from cgdsrMigration.Rmd in cBioPortalData 2.19.13.
cgdsr to cBioPortalData: Migration TutorialUpdated 1 years ago

Karim Mezhoud & Marcel Ramos

Rendered from cgdsrMigration.Rmd in cBioPortalData 2.19.8.
Overview of BiocPkgToolsUpdated 1 years ago

Shian Su, Vince Carey, Marcel Ramos, Lori Shepherd, Martin Morgan, Sean Davis

Rendered from BiocPkgTools.Rmd in BiocPkgTools 1.23.1.
TCGAutils: Helper functions for working with TCGA datasetsUpdated 1 years ago

Marcel Ramos & Levi Waldron

Rendered from TCGAutils.Rmd in TCGAutils 1.27.6.
TCGAutils: Helper functions for working with TCGA datasetsUpdated 1 years ago

Marcel Ramos & Levi Waldron

Rendered from TCGAutils.Rmd in TCGAutils 1.27.6.
cBioPortalData: API Reference Guide for DevsUpdated 1 years ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalRClient.Rmd in cBioPortalData 2.19.13.
cBioPortalData: API Reference Guide for DevsUpdated 1 years ago

Marcel Ramos & Levi Waldron

Rendered from cBioPortalRClient.Rmd in cBioPortalData 2.19.8.
How to branch the Annotation package repositoryUpdated 2 years ago

Bioconductor Maintainer

Rendered from Branch-annotation-repo-HOWTO.Rmd in ReleaseLaunch 0.99.28.
BiocHubsShiny: Interactive Display of Hub ResourcesUpdated 2 years ago

Marcel Ramos, Vincent J. Carey

Rendered from BiocHubsShiny.Rmd in BiocHubsShiny 1.7.4.
BiocHubsShiny: Interactive Display of Hub ResourcesUpdated 2 years ago

Marcel Ramos, Vincent J. Carey

Rendered from BiocHubsShiny.Rmd in BiocHubsShiny 1.7.4.
An Overview of the BiocIO packageUpdated 2 years ago

Daniel Van Twisk, Martin Morgan

Rendered from BiocIO.Rmd in BiocIO 1.17.1.
An Overview of the BiocIO packageUpdated 2 years ago

Daniel Van Twisk, Martin Morgan

Rendered from BiocIO.Rmd in BiocIO 1.17.1.
How to flush the Software repositoryUpdated 2 years ago

Bioconductor Maintainer

Rendered from Flush-Packages-HOWTO.Rmd in ReleaseLaunch 0.99.28.
BiocBaseUtils Quick StartUpdated 3 years ago

Bioconductor Core Team

Rendered from BiocBaseUtils.Rmd in BiocBaseUtils 1.9.0.
BiocBaseUtils Quick StartUpdated 3 years ago

Bioconductor Core Team

Rendered from BiocBaseUtils.Rmd in BiocBaseUtils 1.9.0.
Using DelayedMatrix with MultiAssayExperimentUpdated 3 years ago

MultiAssay Special Interest Group

Rendered from UsingHDF5Array.Rmd in MultiAssayExperiment 1.33.9.
Using DelayedMatrix with MultiAssayExperimentUpdated 3 years ago

MultiAssay Special Interest Group

Rendered from UsingHDF5Array.Rmd in MultiAssayExperiment 1.33.9.
RTCGAToolboxUpdated 4 years ago

Mehmet Kemal Samur

Rendered from RTCGAToolbox-vignette.Rmd in RTCGAToolbox 2.37.2.
RTCGAToolboxUpdated 4 years ago

Mehmet Kemal Samur

Rendered from RTCGAToolbox-vignette.Rmd in RTCGAToolbox 2.37.2.
Cheatsheet for MultiAssayExperimentUpdated 8 years ago

Marcel Ramos

Rendered from MultiAssayExperiment_cheatsheet.pdf.asis in MultiAssayExperiment 1.33.9.
Cheatsheet for MultiAssayExperimentUpdated 8 years ago

Marcel Ramos

Rendered from MultiAssayExperiment_cheatsheet.pdf.asis in MultiAssayExperiment 1.33.9.