Package: UniProt.ws 2.45.1

UniProt.ws: R Interface to UniProt Web Services

The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. This package provides a collection of functions for retrieving, processing, and re-packaging UniProt web services. The package makes use of UniProt's modernized REST API and allows mapping of identifiers accross different databases.

Authors:Marc Carlson [aut], Csaba Ortutay [ctb], Marcel Ramos [aut, cre]

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UniProt.ws.pdf |UniProt.ws.html✨
UniProt.ws/json (API)
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Bug tracker:https://github.com/bioconductor/uniprot.ws/issues

On BioConductor:UniProt.ws-2.45.0(bioc 3.20)UniProt.ws-2.44.0(bioc 3.19)

bioconductor-packagecore-package

18 exports 3 stars 2.42 score 61 dependencies 4 dependents 148 scripts

Last updated 25 days agofrom:c3b64fda93. Checks:OK: 3 NOTE: 4. Indexed: no.

Exports:allFromKeysallToKeysavailableUniprotSpeciescolumnskeyskeytypeslookupUniprotSpeciesFromTaxIdmapUniProtqueryUniProtreturnFieldsselectspeciestaxIdtaxId<-taxname2domaintaxname2speciestaxname2taxidUniProt.ws

Dependencies:AnnotationDbiaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdigestdplyrfansifastmapfilelockgenericsGenomeInfoDbGenomeInfoDbDatagluehmshttpcachehttrIRangesjsonliteKEGGRESTlifecyclemagrittrmemoisemimeopensslpillarpkgconfigplogrpngprettyunitsprogresspurrrR6rjsonconsrlangRSQLiteS4VectorsstringistringrsystibbletidyrtidyselectUCSC.utilsutf8vctrswithrXVectorzlibbioc