This package is considered a duplicate. The official version of this package is found at:https://bioc.r-universe.dev/AnVILBase

Package: AnVILBase 1.7.0

AnVILBase: Generic functions for interacting with the AnVIL ecosystem

Provides generic functions for interacting with the AnVIL ecosystem. Packages that use either GCP or Azure in AnVIL are built on top of AnVILBase. Extension packages will provide methods for interacting with other cloud providers.

Authors:Marcel Ramos [aut, cre], Martin Morgan [aut, ctb], NIH NHGRI U24HG004059 [fnd]

AnVILBase_1.7.0.tar.gz
AnVILBase_1.7.0.zip(r-4.7)AnVILBase_1.7.0.zip(r-4.6)AnVILBase_1.7.0.zip(r-4.5)
AnVILBase_1.7.0.tgz(r-4.6-any)AnVILBase_1.7.0.tgz(r-4.5-any)
AnVILBase_1.7.0.tar.gz(r-4.7-any)AnVILBase_1.7.0.tar.gz(r-4.6-any)
AnVILBase_1.7.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
AnVILBase/json (API)

# Install 'AnVILBase' in R:

install.packages('AnVILBase', repos = c('https://link-ny.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/anvilbase/issues

On BioConductor:AnVILBase-1.7.0(bioc 3.24)AnVILBase-1.6.0(bioc 3.23)

software infrastructure u24hg010263

6.20 score 17 packages 77 scripts 28 exports 24 dependencies

Last updated from:3344f923f2. Checks:9 OK. Indexed: no.

Target	Result	Time
linux-devel-x86_64	OK	145
source / vignettes	OK	249
linux-release-x86_64	OK	156
macos-release-arm64	OK	86
macos-oldrel-arm64	OK	97
windows-devel	OK	120
windows-release	OK	110
windows-oldrel	OK	94
wasm-release	OK	126

Exports:avbackup avcopy avlist avnotebooks avnotebooks_delocalize avnotebooks_localize avplatform_namespace avremove avrestore avstop_for_status avstorage avtable avtable_delete avtable_delete_values avtable_import avtable_import_set avtables avworkflow_jobs avworkspace avworkspace_clone avworkspace_name avworkspace_namespace avworkspaces avworkspaces_clean cloud_platform flatten has_avworkspace str

Dependencies:askpass cli curl dplyr generics glue httr httr2 jsonlite lifecycle magrittr mime openssl pillar pkgconfig R6 rappdirs rlang sys tibble tidyselect utf8 vctrs withr

Introduction to AnVILBase

Rendered fromAnVILBaseIntroduction.Rmdusingknitr::rmarkdown

Last update: 2024-07-02
Started: 2024-03-08

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
The AnVILBase package	AnVILBase-package AnVILBase
All the generics for AnVIL	AnVILBase-generics avbackup avcopy avlist avremove avrestore avstorage
The AnVILBase methods for 'missing' and 'ANY' signatures	AnVILBase-methods avbackup,ANY-method avbackup,missing-method avcopy,ANY-method avcopy,missing-method avlist,ANY-method avlist,missing-method avremove,ANY-method avremove,missing-method avrestore,ANY-method avrestore,missing-method avstorage,ANY-method avstorage,missing-method
Helper functions for working in AnVIL	avbase-utilities avstop_for_status avworkspaces_clean
All the avnotebooks generics for AnVIL	avnotebooks avnotebooks-generics avnotebooks_delocalize avnotebooks_localize
All the notebook type methods for AnVIL	avnotebooks,ANY-method avnotebooks,missing-method avnotebooks-methods avnotebooks_delocalize,ANY-method avnotebooks_delocalize,missing-method avnotebooks_localize,ANY-method avnotebooks_localize,missing-method
All the table type generics for AnVIL	avtable avtable-generics avtables avtable_delete avtable_delete_values avtable_import avtable_import_set
The avtable methods for 'missing' and 'ANY' signatures	avtable,ANY-method avtable,missing-method avtable-methods avtables,ANY-method avtables,missing-method avtable_delete,ANY-method avtable_delete,missing-method avtable_delete_values,ANY-method avtable_delete_values,missing-method avtable_import,ANY-method avtable_import,missing-method avtable_import_set,ANY-method avtable_import_set,missing-method
All the workflow type generics for AnVIL	avworkflow-generics avworkflow_jobs
All the workflow type methods for AnVIL	avworkflow-methods avworkflow_jobs,ANY-method avworkflow_jobs,missing-method
All the table type generics for AnVIL	avworkspace avworkspace-generics avworkspaces avworkspace_clone avworkspace_name avworkspace_namespace
The 'avworkspace' methods for 'missing' and 'ANY' signatures	avworkspace,ANY-method avworkspace,missing-method avworkspace-methods avworkspaces,ANY-method avworkspaces,missing-method avworkspace_clone,ANY-method avworkspace_clone,missing-method avworkspace_name,ANY-method avworkspace_name,missing-method avworkspace_namespace,ANY-method avworkspace_namespace,missing-method
Cloud Platform Identifier	avplatform_namespace cloud_platform
The generic for checking if the user is within an environment	has_avworkspace has_avworkspace-generics
The 'has_avworkspace' methods for 'missing' and 'ANY' signatures.	has_avworkspace,ANY-method has_avworkspace,missing-method has_avworkspace-methods
Virtual Class for Platform	.Platform Platform-class
Process service responses to tibble and other data structures.	as.list.response flatten flatten,httr2_response-method flatten,response-method Response str,response-method